Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit b | DW869_02570 | Not Available | Positive | 677033 - 677629 | 22081.9 |
| nadh-quinone oxidoreductase subunit d | DW869_02575 | Not Available | Positive | 677626 - 679185 | 59775.7 |
| nadh-quinone oxidoreductase subunit h | DW869_02580 | Not Available | Positive | 679309 - 680385 | 40265.7 |
| nadh-quinone oxidoreductase subunit i | DW869_02585 | Not Available | Positive | 680385 - 680837 | 16944.7 |
| nadh-quinone oxidoreductase subunit j | DW869_02590 | Not Available | Positive | 680853 - 681356 | 18224.2 |
| nadh-quinone oxidoreductase subunit nuok | DW869_02595 | Not Available | Positive | 681362 - 681670 | 11758.6 |
| nadh-quinone oxidoreductase subunit l | DW869_02600 | Not Available | Positive | 681673 - 683574 | 70360.2 |
| nadh-quinone oxidoreductase subunit m | DW869_02605 | Not Available | Positive | 683628 - 685109 | 53794.6 |
| nadh-quinone oxidoreductase subunit n | DW869_02610 | Not Available | Positive | 685140 - 686561 | 52272.5 |
| glucuronyl hydrolase | DW869_02615 | Not Available | Positive | 686737 - 687963 | 46630.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

