Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | DW869_02460 | Not Available | Negative | 644290 - 645687 | 53029.0 |
| dna-binding protein | DW869_02465 | Not Available | Positive | 646016 - 646696 | 25970.1 |
| rna polymerase sigma-70 factor | DW869_02470 | Not Available | Negative | 646889 - 647455 | 22251.9 |
| fecr family protein | DW869_02475 | Not Available | Positive | 647599 - 648612 | 38552.0 |
| susc/raga family tonb-linked outer membrane protein | DW869_02480 | Not Available | Positive | 648866 - 652231 | 124292.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW869_02485 | Not Available | Positive | 652244 - 653869 | 61328.7 |
| arylsulfatase | DW869_02490 | Not Available | Positive | 653887 - 655302 | 53071.1 |
| glycosyl hydrolase family 43 | DW869_02495 | Not Available | Positive | 655703 - 657025 | 49800.6 |
| hypothetical protein | DW869_02510 | Not Available | Negative | 659866 - 660561 | 26655.1 |
| glycoside hydrolase family 28 protein | DW869_02515 | Not Available | Positive | 660774 - 662558 | 66033.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

