Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DW869_00115 | Not Available | Negative | 35214 - 36728 | 55595.4 |
| hypothetical protein | DW869_00120 | Not Available | Positive | 36838 - 37068 | 9117.75 |
| arac family transcriptional regulator | DW869_00125 | Not Available | Negative | 37061 - 37951 | 34355.3 |
| pyrroline-5-carboxylate reductase | DW869_00130 | Not Available | Negative | 38134 - 38907 | 27247.4 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DW869_00135 | Not Available | Negative | 39091 - 40215 | 40936.8 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DW869_00140 | Not Available | Negative | 40229 - 41197 | 36000.4 |
| argininosuccinate synthase | DW869_00145 | Not Available | Negative | 41203 - 42411 | 45126.7 |
| n-acetyltransferase | DW869_00150 | Not Available | Negative | 42512 - 43069 | 20661.0 |
| arginine repressor | DW869_00155 | Not Available | Negative | 43092 - 43568 | 17529.3 |
| rhamnulokinase | DW869_00160 | Not Available | Positive | 43875 - 45353 | 55022.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

