Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_02255 | Not Available | Negative | 563379 - 563771 | 14353.5 |
| site-specific integrase | DW869_02260 | Not Available | Negative | 563789 - 565021 | 47267.4 |
| hypothetical protein | DW869_02265 | Not Available | Negative | 565285 - 566445 | 43448.3 |
| pectate lyase | DW869_02270 | Not Available | Negative | 566466 - 568079 | 61374.3 |
| cupin domain-containing protein | DW869_02275 | Not Available | Positive | 568268 - 568759 | 18194.0 |
| hypothetical protein | DW869_02280 | Not Available | Negative | 568853 - 570853 | 74894.4 |
| duf4968 domain-containing protein | DW869_02285 | Not Available | Negative | 570871 - 573255 | 91820.7 |
| glycoside hydrolase family 2 | DW869_02290 | Not Available | Negative | 573269 - 576637 | 126834.0 |
| hypothetical protein | DW869_02295 | Not Available | Negative | 576678 - 579224 | 95138.0 |
| duf5060 domain-containing protein | DW869_02300 | Not Available | Negative | 579418 - 581025 | 61914.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

