Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic phosphate transporter | DW869_02195 | Not Available | Positive | 544905 - 547157 | 83827.5 |
| aminoglycoside phosphotransferase | DW869_02200 | Not Available | Positive | 547265 - 548347 | 41591.0 |
| s9 family peptidase | DW869_02205 | Not Available | Negative | 548433 - 550874 | 94204.0 |
| hypothetical protein | DW869_02210 | Not Available | Negative | 550984 - 551718 | 27025.3 |
| hybrid sensor histidine kinase/response regulator | DW869_02215 | Not Available | Negative | 551914 - 556314 | 169253.0 |
| pectin esterase | DW869_02220 | Not Available | Negative | 556510 - 558237 | 64096.8 |
| hypothetical protein | DW869_02230 | Not Available | Negative | 558463 - 559188 | 28359.0 |
| duf2262 domain-containing protein | DW869_02235 | Not Available | Negative | 559710 - 560225 | 19746.2 |
| mobilization protein | DW869_02245 | Not Available | Negative | 561419 - 562786 | 52634.9 |
| hypothetical protein | DW869_02250 | Not Available | Negative | 563050 - 563382 | 12502.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

