Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DW869_02095 | Not Available | Positive | 524230 - 525705 | 54874.2 |
| noncanonical pyrimidine nucleotidase, yjjg family | DW869_02100 | Not Available | Negative | 525856 - 526545 | 26896.8 |
| hypothetical protein | DW869_02105 | Not Available | Negative | 526621 - 527469 | 31533.4 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DW869_02110 | Not Available | Negative | 527498 - 528172 | 24887.2 |
| thymidine kinase | DW869_02115 | Not Available | Positive | 528377 - 528976 | 22372.9 |
| ai-2e family transporter | DW869_02120 | Not Available | Positive | 528987 - 530123 | 42756.2 |
| Trna-lys | Not Available | Not Available | Positive | 530215 - 530290 | Not Available |
| hypothetical protein | DW869_02130 | Not Available | Negative | 530635 - 530886 | 9782.83 |
| hypothetical protein | DW869_02135 | Not Available | Negative | 530929 - 531024 | 3305.9 |
| cardiolipin synthase | DW869_02140 | Not Available | Positive | 531393 - 532688 | 49710.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

