Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66-like element isbvu4 family transposase | DW869_22135 | Not Available | Negative | 5093087 - 5094700 | 61911.8 |
| hypothetical protein | DW869_22140 | Not Available | Negative | 5094769 - 5095278 | 19798.7 |
| hypothetical protein | DW869_22150 | Not Available | Positive | 5096530 - 5096979 | 17284.2 |
| is110 family transposase | DW869_22155 | Not Available | Positive | 5097491 - 5098780 | 48922.9 |
| dde transposase | DW869_22160 | Not Available | Negative | 5098966 - 5100324 | 52919.8 |
| is21 family transposase | DW869_22165 | Not Available | Positive | 5100422 - 5100709 | 11113.3 |
| aaa family atpase | DW869_22170 | Not Available | Positive | 5100720 - 5101493 | 29628.1 |
| mobilization protein | DW869_22185 | Not Available | Positive | 5103564 - 5103693 | 5033.34 |
| dna primase | DW869_22190 | Not Available | Positive | 5103906 - 5104317 | 15461.5 |
| hypothetical protein | DW869_22195 | Not Available | Positive | 5104384 - 5104725 | 13634.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

