Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DW869_22080 | Not Available | Negative | 5081913 - 5083001 | 40613.5 |
| atp-binding protein | DW869_22090 | Not Available | Negative | 5083826 - 5084756 | 35831.3 |
| hypothetical protein | DW869_22095 | Not Available | Positive | 5084757 - 5087860 | 115748.0 |
| mobilization protein | DW869_22100 | Not Available | Positive | 5087861 - 5088248 | 14930.8 |
| repa protein | DW869_22105 | Not Available | Positive | 5088714 - 5089310 | 22934.6 |
| hypothetical protein | DW869_22110 | Not Available | Positive | 5089322 - 5089573 | 9201.44 |
| hypothetical protein | DW869_22115 | Not Available | Positive | 5089642 - 5089839 | 7373.13 |
| mobilization protein | DW869_22120 | Not Available | Positive | 5089929 - 5090643 | 27178.4 |
| site-specific integrase | DW869_22125 | Not Available | Negative | 5091239 - 5092399 | 44986.7 |
| hypothetical protein | DW869_22130 | Not Available | Positive | 5092767 - 5092987 | 7666.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

