Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transporter | DW869_02040 | Not Available | Negative | 503729 - 505390 | 59396.9 |
| nad(+) diphosphatase | DW869_02045 | Not Available | Negative | 505467 - 506264 | 30147.3 |
| rna-binding transcriptional accessory protein | DW869_02050 | Not Available | Negative | 506287 - 508416 | 79654.4 |
| tonb-dependent receptor | DW869_02060 | Not Available | Positive | 510382 - 513273 | 106967.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW869_02065 | Not Available | Positive | 513286 - 514782 | 56804.6 |
| tonb-dependent receptor | DW869_02070 | Not Available | Positive | 515010 - 517970 | 109741.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW869_02075 | Not Available | Positive | 517995 - 519536 | 57175.1 |
| hypothetical protein | DW869_02080 | Not Available | Positive | 519561 - 520349 | 28499.5 |
| hypothetical protein | DW869_02085 | Not Available | Negative | 520660 - 520893 | 9175.22 |
| tonb-dependent receptor | DW869_02090 | Not Available | Positive | 521409 - 524201 | 103956.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

