Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exo-poly-alpha-d-galacturonosidase | DW869_21865 | Not Available | Negative | 5055559 - 5055957 | 15875.0 |
| type ii toxin-antitoxin system pemk/mazf family toxin | DW869_21870 | Not Available | Negative | 5055994 - 5056314 | 12294.0 |
| abrb/maze/spovt family dna-binding domain-containing protein | DW869_21875 | Not Available | Negative | 5056308 - 5056556 | 9201.96 |
| hypothetical protein | DW869_21880 | Not Available | Positive | 5056962 - 5058212 | 48258.3 |
| hypothetical protein | DW869_21890 | Not Available | Positive | 5059027 - 5059605 | 22237.3 |
| hypothetical protein | DW869_21895 | Not Available | Negative | 5059609 - 5060588 | 37753.6 |
| mannose-1-phosphate guanylyltransferase | DW869_21900 | Not Available | Negative | 5060660 - 5061703 | 39523.2 |
| Trna-leu | Not Available | Not Available | Positive | 5061888 - 5061974 | Not Available |
| fic family protein | DW869_21910 | Not Available | Positive | 5062133 - 5062942 | 30839.3 |
| hypothetical protein | DW869_21920 | Not Available | Negative | 5063345 - 5064061 | 27254.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

