Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_21810 | Not Available | Positive | 5043054 - 5043242 | 7385.01 |
| crp/fnr family transcriptional regulator | DW869_21815 | Not Available | Negative | 5043346 - 5043948 | 23444.3 |
| ragb/susd family nutrient uptake outer membrane protein | DW869_21820 | Not Available | Negative | 5043958 - 5045550 | 60955.6 |
| susc/raga family tonb-linked outer membrane protein | DW869_21825 | Not Available | Negative | 5045587 - 5048283 | 98568.0 |
| hypothetical protein | DW869_21830 | Not Available | Positive | 5049000 - 5049239 | 9121.88 |
| hypothetical protein | DW869_21835 | Not Available | Positive | 5049458 - 5049757 | 11714.9 |
| invertase | DW869_21845 | Not Available | Negative | 5051165 - 5051776 | 23063.3 |
| glycoside hydrolase family 127 protein | DW869_21850 | Not Available | Positive | 5052153 - 5054588 | 91078.9 |
| susc/raga family tonb-linked outer membrane protein | DW869_21855 | Not Available | Positive | 5054623 - 5054988 | 13171.9 |
| hypothetical protein | DW869_21860 | Not Available | Negative | 5055280 - 5055471 | 6891.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

