Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DW869_21760 | Not Available | Positive | 5029276 - 5029513 | 9005.92 |
| hypothetical protein | DW869_21765 | Not Available | Positive | 5029575 - 5032199 | 94962.7 |
| hypothetical protein | DW869_21770 | Not Available | Negative | 5032330 - 5032677 | 13604.0 |
| hypothetical protein | DW869_21775 | Not Available | Negative | 5032753 - 5036055 | 122717.0 |
| helix-turn-helix domain-containing protein | DW869_21780 | Not Available | Negative | 5036104 - 5036350 | 9192.14 |
| hypothetical protein | DW869_21785 | Not Available | Negative | 5036407 - 5037396 | 37752.0 |
| lipoyl synthase | DW869_21790 | Not Available | Negative | 5037454 - 5038308 | 31713.2 |
| s9 family peptidase | DW869_21795 | Not Available | Negative | 5038407 - 5040608 | 83440.0 |
| tigr01212 family radical sam protein | DW869_21800 | Not Available | Positive | 5040695 - 5041621 | 35539.8 |
| fpra family a-type flavoprotein | DW869_21805 | Not Available | Positive | 5041637 - 5042824 | 44710.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

