Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rlob domain-containing protein | DW869_21655 | Not Available | Negative | 5010580 - 5011152 | 22547.1 |
| atp-binding protein | DW869_21660 | Not Available | Negative | 5011165 - 5012373 | 46121.9 |
| hypothetical protein | DW869_21665 | Not Available | Positive | 5013121 - 5013345 | 8663.71 |
| atp-dependent helicase | DW869_21675 | Not Available | Negative | 5013723 - 5014324 | 23205.2 |
| hepn domain-containing protein | DW869_21680 | Not Available | Negative | 5014591 - 5014995 | 15473.8 |
| nucleotidyltransferase domain-containing protein | DW869_21685 | Not Available | Negative | 5014989 - 5015312 | 12718.4 |
| hypothetical protein | DW869_21690 | Not Available | Negative | 5015799 - 5016065 | 10675.0 |
| hypothetical protein | DW869_21695 | Not Available | Negative | 5016143 - 5016955 | 31038.5 |
| nad(p)-dependent oxidoreductase | DW869_21700 | Not Available | Negative | 5016961 - 5017977 | 37972.1 |
| glycosyltransferase family 4 protein | DW869_21705 | Not Available | Negative | 5017984 - 5019099 | 42897.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

