Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3298 domain-containing protein | DW869_21545 | Not Available | Positive | 4981989 - 4982837 | 32058.1 |
| ribosomal rna small subunit methyltransferase g | DW869_21550 | Not Available | Positive | 4982858 - 4983487 | 23835.2 |
| mbl fold metallo-hydrolase | DW869_21555 | Not Available | Positive | 4983505 - 4984143 | 23832.3 |
| glycine dehydrogenase (aminomethyl-transferring) | DW869_21560 | Not Available | Positive | 4984179 - 4987028 | 105256.0 |
| peptidylprolyl isomerase | DW869_21565 | Not Available | Negative | 4987210 - 4987788 | 21017.5 |
| hypothetical protein | DW869_21570 | Not Available | Positive | 4988144 - 4988518 | 14035.0 |
| dihydroxy-acid dehydratase | DW869_21575 | Not Available | Positive | 4988932 - 4990734 | 64117.2 |
| biosynthetic-type acetolactate synthase large subunit | DW869_21580 | Not Available | Positive | 4990834 - 4992531 | 61841.6 |
| acetolactate synthase small subunit | DW869_21585 | Not Available | Positive | 4992542 - 4993096 | 21284.6 |
| acyl-[acyl-carrier-protein] thioesterase | DW869_21590 | Not Available | Positive | 4993096 - 4993839 | 28470.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

