Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-nucleoside phosphorylase | DW869_21495 | Not Available | Negative | 4968304 - 4969113 | 29954.3 |
| tetraacyldisaccharide 4'-kinase | DW869_21500 | Not Available | Negative | 4969076 - 4970176 | 42284.6 |
| signal peptide peptidase sppa | DW869_21505 | Not Available | Negative | 4970184 - 4971965 | 65880.9 |
| nitroreductase family protein | DW869_21510 | Not Available | Positive | 4972100 - 4972705 | 23172.8 |
| bifunctional fucokinase/l-fucose-1-p-guanylyltransferase | DW869_21515 | Not Available | Positive | 4972779 - 4975619 | 105147.0 |
| glycerate kinase | DW869_21520 | Not Available | Negative | 4975606 - 4976745 | 39726.5 |
| lipoyl(octanoyl) transferase lipb | DW869_21525 | Not Available | Negative | 4977109 - 4978197 | 40904.7 |
| phosphohydrolase | DW869_21530 | Not Available | Positive | 4978263 - 4978964 | 27543.0 |
| hypothetical protein | DW869_21535 | Not Available | Positive | 4978961 - 4979509 | 20508.7 |
| copper-translocating p-type atpase | DW869_21540 | Not Available | Negative | 4979597 - 4981810 | 80014.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

