Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_21440 | Not Available | Negative | 4958970 - 4959239 | 9733.04 |
| hypothetical protein | DW869_21445 | Not Available | Positive | 4959633 - 4959830 | 7552.05 |
| duf1738 domain-containing protein | DW869_21450 | Not Available | Positive | 4959827 - 4961446 | 61102.3 |
| hypothetical protein | DW869_21455 | Not Available | Positive | 4961487 - 4962872 | 50569.1 |
| hypothetical protein | DW869_21460 | Not Available | Positive | 4962903 - 4963679 | 29114.4 |
| is982 family transposase | DW869_21470 | Not Available | Positive | 4964423 - 4964841 | 16823.8 |
| hypothetical protein | DW869_21475 | Not Available | Negative | 4965214 - 4965588 | 14497.1 |
| site-specific integrase | DW869_21480 | Not Available | Negative | 4965592 - 4966824 | 47218.8 |
| Trna-phe | Not Available | Not Available | Positive | 4967069 - 4967141 | Not Available |
| thiamine-phosphate kinase | DW869_21490 | Not Available | Negative | 4967259 - 4968299 | 38286.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

