Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rtec protein | DW869_21170 | Not Available | Negative | 4902489 - 4903325 | 32127.3 |
| arac family transcriptional regulator | DW869_21175 | Not Available | Negative | 4903448 - 4904317 | 33679.8 |
| hypothetical protein | DW869_21180 | Not Available | Negative | 4904314 - 4904496 | 6732.11 |
| hypothetical protein | DW869_21185 | Not Available | Negative | 4904543 - 4905082 | 21188.7 |
| hypothetical protein | DW869_21190 | Not Available | Negative | 4905113 - 4905415 | 11407.0 |
| wg repeat-containing protein | DW869_21195 | Not Available | Positive | 4905547 - 4906302 | 29758.6 |
| glycosyltransferase family 2 protein | DW869_21210 | Not Available | Positive | 4908598 - 4909473 | 34185.8 |
| glycosyltransferase family 4 protein | DW869_21215 | Not Available | Positive | 4909473 - 4910582 | 42339.2 |
| glycosyltransferase | DW869_21225 | Not Available | Positive | 4911666 - 4912774 | 42645.5 |
| glycoside hydrolase family 16 protein | DW869_21230 | Not Available | Positive | 4912817 - 4913608 | 30544.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

