Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | DW869_21110 | Not Available | Negative | 4898206 - 4898758 | 20883.4 |
| Trna-thr | Not Available | Not Available | Positive | 4899425 - 4899499 | Not Available |
| hypothetical protein | DW869_21125 | Not Available | Negative | 4899501 - 4899737 | 9017.67 |
| hypothetical protein | DW869_21130 | Not Available | Negative | 4899759 - 4900022 | 9725.32 |
| hypothetical protein | DW869_21135 | Not Available | Negative | 4900042 - 4900263 | 8412.13 |
| hypothetical protein | DW869_21140 | Not Available | Negative | 4900256 - 4900531 | 10750.8 |
| hypothetical protein | DW869_21145 | Not Available | Negative | 4900528 - 4900749 | 8293.91 |
| hypothetical protein | DW869_21150 | Not Available | Negative | 4900752 - 4900970 | 8234.98 |
| duf4373 domain-containing protein | DW869_21155 | Not Available | Negative | 4900990 - 4901361 | 14419.2 |
| hypothetical protein | DW869_21160 | Not Available | Negative | 4901446 - 4901820 | 14698.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

