Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_21055 | Not Available | Negative | 4885673 - 4886005 | 12201.0 |
| plasmid mobilization relaxosome protein mobc | DW869_21060 | Not Available | Positive | 4886051 - 4886416 | 13840.7 |
| mobilization protein | DW869_21065 | Not Available | Positive | 4886413 - 4887333 | 35047.2 |
| hypothetical protein | DW869_21070 | Not Available | Positive | 4887337 - 4887816 | 18413.9 |
| site-specific integrase | DW869_21075 | Not Available | Positive | 4887818 - 4889020 | 46268.0 |
| restriction endonuclease subunit m | DW869_21080 | Not Available | Positive | 4889276 - 4890310 | 39722.2 |
| dead/deah box helicase | DW869_21085 | Not Available | Positive | 4890307 - 4894230 | 149442.0 |
| hypothetical protein | DW869_21090 | Not Available | Positive | 4894316 - 4894762 | 17298.8 |
| hypothetical protein | DW869_21095 | Not Available | Positive | 4894950 - 4897265 | 91220.9 |
| hypothetical protein | DW869_21100 | Not Available | Positive | 4897549 - 4897740 | 7293.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

