Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DW869_21000 | Not Available | Negative | 4875640 - 4876200 | 21680.7 |
| molecular chaperone dnak | DW869_21010 | Not Available | Negative | 4876418 - 4878337 | 68429.3 |
| meta domain-containing protein | DW869_21015 | Not Available | Negative | 4878666 - 4879457 | 28666.9 |
| hypothetical protein | DW869_21020 | Not Available | Positive | 4879582 - 4880835 | 47815.2 |
| saccharopine dehydrogenase family protein | DW869_21025 | Not Available | Positive | 4880919 - 4882112 | 44966.5 |
| thioredoxin-dependent thiol peroxidase | DW869_21030 | Not Available | Positive | 4882180 - 4882626 | 16924.4 |
| recombinase reca | DW869_21035 | Not Available | Positive | 4882639 - 4883682 | 37366.7 |
| hypothetical protein | DW869_21040 | Not Available | Positive | 4883861 - 4884379 | 20336.3 |
| dna-binding protein | DW869_21045 | Not Available | Negative | 4884553 - 4884855 | 11724.1 |
| dna-binding protein | DW869_21050 | Not Available | Negative | 4884889 - 4885200 | 12606.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

