Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_20950 | Not Available | Positive | 4866538 - 4867489 | 35767.9 |
| integrase | DW869_20955 | Not Available | Positive | 4867528 - 4868127 | 22180.9 |
| hypothetical protein | DW869_20960 | Not Available | Negative | 4868139 - 4868630 | 18364.3 |
| relaxase | DW869_20965 | Not Available | Negative | 4868649 - 4869857 | 45234.6 |
| hypothetical protein | DW869_20970 | Not Available | Negative | 4869870 - 4870253 | 14678.7 |
| marr family transcriptional regulator | DW869_20975 | Not Available | Negative | 4870668 - 4871222 | 20143.0 |
| hypothetical protein | DW869_20980 | Not Available | Negative | 4871235 - 4872242 | 38477.7 |
| duf3987 domain-containing protein | DW869_20985 | Not Available | Negative | 4872359 - 4873735 | 52112.3 |
| dna-binding protein | DW869_20990 | Not Available | Negative | 4873735 - 4874094 | 14059.9 |
| site-specific integrase | DW869_20995 | Not Available | Negative | 4874387 - 4875643 | 48292.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

