Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein | DW869_20895 | Not Available | Negative | 4844149 - 4846182 | 74735.8 |
| arac family transcriptional regulator | DW869_20900 | Not Available | Negative | 4846315 - 4848066 | 68500.7 |
| tonb-dependent receptor | DW869_20905 | Not Available | Positive | 4848253 - 4851183 | 108841.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW869_20910 | Not Available | Positive | 4851184 - 4852725 | 58745.0 |
| tonb-dependent receptor | DW869_20915 | Not Available | Positive | 4853148 - 4856141 | 110896.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW869_20920 | Not Available | Positive | 4856165 - 4857751 | 58738.4 |
| gtpase hflx | DW869_20925 | Not Available | Positive | 4857843 - 4859096 | 47657.6 |
| duf4954 family protein | DW869_20930 | Not Available | Positive | 4859110 - 4861095 | 74479.4 |
| coce/nond family hydrolase | DW869_20935 | Not Available | Negative | 4861243 - 4863150 | 73930.9 |
| fumarate hydratase | DW869_20940 | Not Available | Positive | 4863289 - 4864932 | 60487.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

