Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate formate lyase-activating protein | DW869_01935 | Not Available | Negative | 480646 - 481374 | 27977.5 |
| formate c-acetyltransferase | DW869_01940 | Not Available | Negative | 481443 - 483671 | 84089.3 |
| Trna-glu | Not Available | Not Available | Positive | 483875 - 483950 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 484303 - 484392 | Not Available |
| hypothetical protein | DW869_01955 | Not Available | Negative | 484371 - 484562 | 7204.75 |
| Trna-cys | Not Available | Not Available | Positive | 485071 - 485145 | Not Available |
| ferrous iron transport protein b | DW869_01970 | Not Available | Negative | 485452 - 487920 | 92758.5 |
| trna lysidine(34) synthetase tils | DW869_01975 | Not Available | Positive | 488041 - 489345 | 50137.6 |
| tetratricopeptide repeat protein | DW869_01980 | Not Available | Negative | 489484 - 491184 | 62540.1 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DW869_01985 | Not Available | Negative | 491221 - 491988 | 28167.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

