Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM38-19
Accession NumberQSHD00000000.1
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter | DW869_00085 | Not Available | - | 23313 - 25190 | 70525.3 |
| 5s ribosomal rna | Not Available | Not Available | + | 25259 - 25369 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 25448 - 28340 | Not Available |
| alkaline phosphatase | DW869_00090 | Not Available | - | 25208 - 26110 | 32983.6 |
| glycosidase | DW869_00095 | Not Available | - | 26268 - 27446 | 44156.4 |
| 16s ribosomal rna | Not Available | Not Available | + | 28762 - 30295 | Not Available |
| aryl-sulfate sulfotransferase | DW869_00100 | Not Available | - | 27560 - 29359 | 68255.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW869_00105 | Not Available | - | 29561 - 31327 | 67693.4 |
| 5s ribosomal rna | Not Available | Not Available | + | 32303 - 32413 | Not Available |
| tonb-dependent receptor | DW869_00110 | Not Available | - | 31354 - 34383 | 110516.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
