Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| v-type atp synthase subunit d | DW869_20795 | Not Available | Negative | 4824149 - 4824754 | 23447.8 |
| v-type atp synthase subunit b | DW869_20800 | Not Available | Negative | 4824769 - 4826091 | 48182.8 |
| v-type atp synthase subunit a | DW869_20805 | Not Available | Negative | 4826127 - 4827881 | 65785.3 |
| duf2764 domain-containing protein | DW869_20810 | Not Available | Negative | 4827900 - 4828736 | 32594.0 |
| hypothetical protein | DW869_20815 | Not Available | Negative | 4828746 - 4829336 | 21755.7 |
| hypothetical protein | DW869_20820 | Not Available | Negative | 4829667 - 4830467 | 30027.9 |
| ribonuclease y | DW869_20825 | Not Available | Negative | 4830659 - 4832194 | 57327.7 |
| cell division protein zapa | DW869_20830 | Not Available | Negative | 4832295 - 4832588 | 11772.0 |
| hypothetical protein | DW869_20835 | Not Available | Negative | 4832618 - 4832911 | 11779.2 |
| duf454 domain-containing protein | DW869_20840 | Not Available | Negative | 4833084 - 4833446 | 14082.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

