Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase family protein | DW869_20570 | Not Available | Negative | 4767778 - 4769604 | 68080.2 |
| ribonuclease h | DW869_20575 | Not Available | Negative | 4769620 - 4770246 | 23847.5 |
| arginine--trna ligase | DW869_20580 | Not Available | Negative | 4770247 - 4772067 | 68001.7 |
| glycosyltransferase | DW869_20585 | Not Available | Positive | 4772824 - 4773537 | 27680.1 |
| hypothetical protein | DW869_20590 | Not Available | Negative | 4773441 - 4773671 | 9075.28 |
| hypothetical protein | DW869_20595 | Not Available | Positive | 4773678 - 4774532 | 31777.9 |
| acyltransferase | DW869_20600 | Not Available | Negative | 4774639 - 4775799 | 44359.1 |
| m3 family peptidase | DW869_20605 | Not Available | Negative | 4775980 - 4778085 | 79237.0 |
| abc transporter permease | DW869_20610 | Not Available | Positive | 4778407 - 4780716 | 86250.5 |
| abc transporter atp-binding protein | DW869_20615 | Not Available | Positive | 4780751 - 4781425 | 24853.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

