Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_20520 | Not Available | Negative | 4756514 - 4756636 | 4374.19 |
| hypothetical protein | DW869_20525 | Not Available | Negative | 4756648 - 4756899 | 9670.05 |
| glycosyltransferase | DW869_20530 | Not Available | Negative | 4756908 - 4757840 | 35598.7 |
| abc transporter atp-binding protein | DW869_20535 | Not Available | Negative | 4757842 - 4759680 | 68820.3 |
| glycosyltransferase | DW869_20540 | Not Available | Negative | 4759738 - 4761054 | 50584.3 |
| glycosyltransferase family 2 protein | DW869_20545 | Not Available | Positive | 4761300 - 4762283 | 38355.5 |
| lta synthase family protein | DW869_20550 | Not Available | Positive | 4762467 - 4764494 | 77452.9 |
| glycosyltransferase | DW869_20555 | Not Available | Negative | 4764525 - 4765472 | 36580.4 |
| gtra family protein | DW869_20560 | Not Available | Negative | 4765509 - 4765883 | 14231.0 |
| glycosyltransferase family 39 protein | DW869_20565 | Not Available | Positive | 4765970 - 4767694 | 65302.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

