Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp20/alpha crystallin family protein | DW869_20300 | Not Available | Negative | 4708265 - 4708693 | 16368.5 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | DW869_20305 | Not Available | Negative | 4708761 - 4709510 | 28491.2 |
| class i fructose-bisphosphate aldolase | DW869_20310 | Not Available | Negative | 4709524 - 4710573 | 38083.6 |
| ferritin | DW869_20315 | Not Available | Negative | 4710602 - 4711084 | 18303.6 |
| marc family protein | DW869_20320 | Not Available | Negative | 4711135 - 4711860 | 27114.4 |
| hypothetical protein | DW869_20330 | Not Available | Negative | 4712499 - 4712708 | 8005.49 |
| hypothetical protein | DW869_20335 | Not Available | Negative | 4712699 - 4712884 | 7038.73 |
| hypothetical protein | DW869_20340 | Not Available | Positive | 4712886 - 4713107 | 8694.83 |
| 2-isopropylmalate synthase | DW869_20345 | Not Available | Positive | 4713766 - 4715262 | 54450.0 |
| 3-isopropylmalate dehydratase large subunit | DW869_20350 | Not Available | Positive | 4715280 - 4716662 | 50049.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

