Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DW869_01885 | Not Available | Positive | 471406 - 472149 | 27195.8 |
| abc transporter permease | DW869_01890 | Not Available | Positive | 472168 - 473388 | 44093.1 |
| histidine kinase | DW869_01895 | Not Available | Positive | 473582 - 474637 | 40176.1 |
| dna-binding response regulator | DW869_01900 | Not Available | Positive | 474634 - 475359 | 27838.9 |
| tryptophan-rich sensory protein | DW869_01905 | Not Available | Positive | 475644 - 476108 | 18163.9 |
| hemerythrin domain-containing protein | DW869_01910 | Not Available | Positive | 476234 - 476929 | 27016.5 |
| dna-binding response regulator | DW869_01915 | Not Available | Positive | 476926 - 477537 | 22691.8 |
| (fe-s)-binding protein | DW869_01920 | Not Available | Positive | 477849 - 478589 | 27278.1 |
| lactate utilization protein | DW869_01925 | Not Available | Positive | 478586 - 479953 | 51511.4 |
| hypothetical protein | DW869_01930 | Not Available | Positive | 479957 - 480544 | 21730.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

