Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis protein | DW869_20135 | Not Available | Positive | 4661686 - 4663215 | 57498.5 |
| hypothetical protein | DW869_20140 | Not Available | Positive | 4663200 - 4664654 | 56170.6 |
| hypothetical protein | DW869_20145 | Not Available | Positive | 4664620 - 4665774 | 45419.4 |
| hypothetical protein | DW869_20150 | Not Available | Positive | 4665785 - 4666111 | 12639.8 |
| tonb-dependent receptor | DW869_20155 | Not Available | Positive | 4666122 - 4667572 | 56064.8 |
| duf4249 domain-containing protein | DW869_20160 | Not Available | Positive | 4667579 - 4668565 | 38261.2 |
| rna polymerase sigma-70 factor | DW869_20165 | Not Available | Positive | 4668618 - 4669244 | 24869.6 |
| hypothetical protein | DW869_20170 | Not Available | Positive | 4669300 - 4669707 | 15515.8 |
| duf4974 domain-containing protein | DW869_20175 | Not Available | Positive | 4669734 - 4670624 | 33758.5 |
| tonb-dependent receptor | DW869_20180 | Not Available | Positive | 4670632 - 4673307 | 102190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

