Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | DW869_20030 | Not Available | Positive | 4638971 - 4639834 | 32665.4 |
| dna-binding protein | DW869_20035 | Not Available | Positive | 4640084 - 4640334 | 9866.2 |
| duf3868 domain-containing protein | DW869_20045 | Not Available | Positive | 4640483 - 4641892 | 54398.8 |
| hypothetical protein | DW869_20050 | Not Available | Positive | 4641923 - 4643461 | 55448.4 |
| hypothetical protein | DW869_20055 | Not Available | Positive | 4643485 - 4644432 | 35960.7 |
| site-specific integrase | DW869_20060 | Not Available | Positive | 4644474 - 4645457 | 38267.5 |
| undecaprenyl-phosphate glucose phosphotransferase | DW869_20065 | Not Available | Positive | 4645946 - 4647349 | 54484.1 |
| polysaccharide export protein | DW869_20070 | Not Available | Positive | 4647397 - 4648188 | 28967.2 |
| tyrosine protein kinase | DW869_20075 | Not Available | Positive | 4648197 - 4650608 | 89871.9 |
| n-acetylmuramoyl-l-alanine amidase | DW869_20080 | Not Available | Negative | 4650717 - 4651166 | 16949.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

