Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_19975 | Not Available | Negative | 4628926 - 4629174 | 9253.75 |
| hypothetical protein | DW869_19980 | Not Available | Positive | 4629354 - 4630001 | 24488.9 |
| hypothetical protein | DW869_19985 | Not Available | Positive | 4630014 - 4630511 | 18681.7 |
| glycosyl hydrolase family 88 | DW869_19990 | Not Available | Negative | 4630568 - 4631866 | 49861.6 |
| hypothetical protein | DW869_19995 | Not Available | Positive | 4632208 - 4632411 | 7696.4 |
| recombinase | DW869_20005 | Not Available | Positive | 4632785 - 4634284 | 57429.1 |
| atp-binding protein | DW869_20010 | Not Available | Positive | 4634461 - 4635753 | 48083.1 |
| hypothetical protein | DW869_20015 | Not Available | Positive | 4635777 - 4637141 | 52106.9 |
| dna-binding protein | DW869_20020 | Not Available | Positive | 4637282 - 4637587 | 11649.1 |
| helicase | DW869_20025 | Not Available | Positive | 4637601 - 4638797 | 46913.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

