Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine cyclotransferase | DW869_19925 | Not Available | Positive | 4619932 - 4620936 | 37858.6 |
| sufe family protein | DW869_19930 | Not Available | Positive | 4620948 - 4621376 | 16169.5 |
| tonb-dependent receptor | DW869_19935 | Not Available | Negative | 4621412 - 4623484 | 79119.4 |
| sensor histidine kinase | DW869_19940 | Not Available | Positive | 4623536 - 4625074 | 59598.5 |
| dna-binding response regulator | DW869_19945 | Not Available | Positive | 4625079 - 4625762 | 26125.7 |
| sam-dependent methyltransferase | DW869_19950 | Not Available | Negative | 4625759 - 4626943 | 43869.1 |
| d-alanyl-d-alanine dipeptidase | DW869_19955 | Not Available | Negative | 4626947 - 4627612 | 25264.8 |
| transcriptional regulator | DW869_19960 | Not Available | Negative | 4627636 - 4627983 | 13249.2 |
| thioredoxin | DW869_19965 | Not Available | Negative | 4628021 - 4628500 | 17688.5 |
| hypothetical protein | DW869_19970 | Not Available | Negative | 4628503 - 4628721 | 8004.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

