Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_19875 | Not Available | Negative | 4610624 - 4611148 | 19902.6 |
| relaxase | DW869_19880 | Not Available | Negative | 4611208 - 4612431 | 45848.7 |
| antitoxin pard | DW869_19885 | Not Available | Negative | 4612446 - 4612817 | 14433.7 |
| hypothetical protein | DW869_19890 | Not Available | Negative | 4613019 - 4613669 | 24015.3 |
| hypothetical protein | DW869_19895 | Not Available | Negative | 4613742 - 4614089 | 13345.8 |
| dna-binding protein | DW869_19900 | Not Available | Negative | 4614094 - 4614213 | 4632.6 |
| helicase | DW869_19905 | Not Available | Positive | 4614650 - 4615900 | 47999.1 |
| butyrate kinase | DW869_19910 | Not Available | Negative | 4616038 - 4617102 | 38268.3 |
| phosphate butyryltransferase | DW869_19915 | Not Available | Negative | 4617115 - 4618023 | 33315.3 |
| fused gamma-glutamyl-gamma-aminobutyrate hydrolase/peptidase | DW869_19920 | Not Available | Positive | 4618106 - 4619863 | 64886.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

