Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3836 domain-containing protein | DW869_19820 | Not Available | Negative | 4599972 - 4600391 | 16015.9 |
| bifunctional riboflavin kinase/fad synthetase | DW869_19825 | Not Available | Negative | 4600769 - 4601689 | 35285.5 |
| had family phosphatase | DW869_19830 | Not Available | Negative | 4601689 - 4602303 | 24088.8 |
| calcium-translocating p-type atpase, pmca-type | DW869_19835 | Not Available | Negative | 4602331 - 4604961 | 97082.8 |
| Trna-met | Not Available | Not Available | Positive | 4605117 - 4605190 | Not Available |
| helix-turn-helix domain-containing protein | DW869_19845 | Not Available | Negative | 4605475 - 4606374 | 35570.7 |
| mbl fold metallo-hydrolase | DW869_19850 | Not Available | Positive | 4606505 - 4607281 | 28985.2 |
| radical sam mobile pair protein b | DW869_19855 | Not Available | Positive | 4607514 - 4608389 | 34042.1 |
| qace family quaternary ammonium compound efflux smr transporter | DW869_19860 | Not Available | Negative | 4608816 - 4609148 | 11558.9 |
| arac family transcriptional regulator | DW869_19865 | Not Available | Positive | 4609313 - 4610149 | 32210.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

