Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 4570442 - 4570522 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4570595 - 4570667 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4570715 - 4570798 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4570819 - 4570905 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4570919 - 4570991 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4571039 - 4571122 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4571135 - 4571210 | Not Available |
| glutamine synthetase | DW869_19705 | Not Available | Negative | 4571331 - 4572833 | 56034.0 |
| gnat family n-acetyltransferase | DW869_19710 | Not Available | Positive | 4573039 - 4574571 | 59330.0 |
| pas domain-containing protein | DW869_19715 | Not Available | Negative | 4574698 - 4576020 | 50256.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

