Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_19565 | Not Available | Negative | 4552451 - 4552792 | 13040.2 |
| recombinase family protein | DW869_19570 | Not Available | Positive | 4552938 - 4553531 | 22691.7 |
| duf1738 domain-containing protein | DW869_19575 | Not Available | Positive | 4553998 - 4555008 | 39113.1 |
| hypothetical protein | DW869_19580 | Not Available | Negative | 4555005 - 4555229 | 8365.47 |
| hypothetical protein | DW869_19585 | Not Available | Negative | 4555180 - 4555394 | 8380.09 |
| ribose-phosphate pyrophosphokinase | DW869_19590 | Not Available | Negative | 4555503 - 4556441 | 34190.5 |
| thiamine phosphate synthase | DW869_19595 | Not Available | Negative | 4556606 - 4557214 | 22934.7 |
| hypothetical protein | DW869_19600 | Not Available | Positive | 4557434 - 4557787 | 12947.3 |
| glutathionylspermidine synthase family protein | DW869_19605 | Not Available | Positive | 4557800 - 4558924 | 43073.6 |
| hesa/moeb/thif family protein | DW869_19610 | Not Available | Negative | 4559037 - 4559729 | 25388.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

