Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tran | DW869_19515 | Not Available | Negative | 4543580 - 4544419 | 32360.3 |
| conjugative transposon protein tram | DW869_19520 | Not Available | Negative | 4544421 - 4545530 | 41764.9 |
| hypothetical protein | DW869_19525 | Not Available | Negative | 4545534 - 4545965 | 16696.8 |
| conjugative transposon protein trak | DW869_19530 | Not Available | Negative | 4545965 - 4546579 | 23412.7 |
| plasmid transfer protein | DW869_19535 | Not Available | Negative | 4546612 - 4547634 | 37691.8 |
| hypothetical protein | DW869_19540 | Not Available | Negative | 4547627 - 4548283 | 26006.4 |
| plasmid transfer protein | DW869_19545 | Not Available | Negative | 4548285 - 4548959 | 25473.4 |
| conjugal transfer protein trag | DW869_19550 | Not Available | Negative | 4548970 - 4551810 | 110290.0 |
| duf4133 domain-containing protein | DW869_19555 | Not Available | Negative | 4551816 - 4552115 | 11136.2 |
| duf4134 domain-containing protein | DW869_19560 | Not Available | Negative | 4552117 - 4552431 | 11030.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

