Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_19365 | Not Available | Negative | 4521213 - 4523093 | 73066.4 |
| plasmid mobilization relaxosome protein mobc | DW869_19370 | Not Available | Positive | 4523374 - 4523730 | 14102.4 |
| mobilization protein | DW869_19375 | Not Available | Positive | 4524164 - 4525726 | 60014.4 |
| para family protein | DW869_19380 | Not Available | Positive | 4525743 - 4526366 | 23398.3 |
| hypothetical protein | DW869_19385 | Not Available | Positive | 4526425 - 4526859 | 16497.8 |
| xre family transcriptional regulator | DW869_19390 | Not Available | Negative | 4527149 - 4527535 | 14707.7 |
| type iv secretory system conjugative dna transfer family protein | DW869_19395 | Not Available | Negative | 4527528 - 4529483 | 74508.9 |
| hypothetical protein | DW869_19400 | Not Available | Negative | 4529487 - 4529711 | 8469.28 |
| hypothetical protein | DW869_19405 | Not Available | Negative | 4529886 - 4530329 | 16589.5 |
| hypothetical protein | DW869_19410 | Not Available | Negative | 4530340 - 4530612 | 10359.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

