Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_19305 | Not Available | Positive | 4512539 - 4512922 | 14813.0 |
| hypothetical protein | DW869_19310 | Not Available | Negative | 4513055 - 4513303 | 9443.54 |
| hypothetical protein | DW869_19315 | Not Available | Positive | 4513556 - 4514923 | 51177.3 |
| glycosyltransferase | DW869_19320 | Not Available | Positive | 4514937 - 4515752 | 31005.6 |
| site-specific integrase | DW869_19330 | Not Available | Positive | 4516329 - 4517624 | 49417.7 |
| dna-binding protein | DW869_19335 | Not Available | Negative | 4517718 - 4518035 | 12442.0 |
| dna-binding protein | DW869_19340 | Not Available | Negative | 4518037 - 4518330 | 11678.9 |
| hypothetical protein | DW869_19345 | Not Available | Negative | 4518352 - 4518561 | 8116.76 |
| comf family protein | DW869_19350 | Not Available | Positive | 4518573 - 4519526 | 36641.8 |
| duf4948 domain-containing protein | DW869_19355 | Not Available | Negative | 4519561 - 4520151 | 22426.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

