Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf452 family protein | DW869_01775 | Not Available | Positive | 446906 - 447559 | 25142.3 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | DW869_01780 | Not Available | Positive | 447571 - 448326 | 28797.8 |
| atp-dependent dethiobiotin synthetase biod | DW869_01785 | Not Available | Positive | 448341 - 448985 | 24302.0 |
| hypothetical protein | DW869_01795 | Not Available | Negative | 449429 - 450154 | 25779.0 |
| atp-binding cassette domain-containing protein | DW869_01805 | Not Available | Positive | 450879 - 452327 | 55026.9 |
| dihydrodipicolinate synthase family protein | DW869_01810 | Not Available | Positive | 452490 - 453422 | 34028.5 |
| sodium:solute symporter | DW869_01815 | Not Available | Positive | 453436 - 454869 | 52090.3 |
| nitronate monooxygenase | DW869_01820 | Not Available | Negative | 455078 - 456028 | 34201.4 |
| anaerobic c4-dicarboxylate transporter | DW869_01825 | Not Available | Positive | 456270 - 457568 | 45902.3 |
| l-asparaginase 2 | DW869_01830 | Not Available | Positive | 457737 - 458795 | 37843.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

