Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | DW869_19145 | Not Available | Positive | 4478097 - 4479815 | 62472.2 |
| transcriptional repressor | DW869_19150 | Not Available | Positive | 4479829 - 4480254 | 16179.7 |
| acyltransferase | DW869_19155 | Not Available | Negative | 4480427 - 4481578 | 43063.7 |
| crp/fnr family transcriptional regulator | DW869_19160 | Not Available | Negative | 4481696 - 4482259 | 22255.1 |
| hypothetical protein | DW869_19170 | Not Available | Positive | 4482788 - 4483222 | 16911.9 |
| ph domain-containing protein | DW869_19175 | Not Available | Positive | 4483391 - 4483834 | 16630.7 |
| hypothetical protein | DW869_19180 | Not Available | Positive | 4483954 - 4484166 | 8579.56 |
| helix-turn-helix domain-containing protein | DW869_19185 | Not Available | Positive | 4484888 - 4485223 | 13348.1 |
| bifunctional dna primase/helicase | DW869_19190 | Not Available | Positive | 4485216 - 4487288 | 77712.7 |
| dna-binding protein | DW869_19195 | Not Available | Positive | 4487285 - 4487704 | 16505.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

