Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h nitroreductase | DW869_19095 | Not Available | Negative | 4469495 - 4470031 | 20051.4 |
| gnat family n-acetyltransferase | DW869_19100 | Not Available | Positive | 4470077 - 4471099 | 40091.1 |
| methylmalonyl-coa epimerase | DW869_19105 | Not Available | Positive | 4471256 - 4471669 | 14910.1 |
| acyl-coa carboxylase subunit beta | DW869_19110 | Not Available | Positive | 4471772 - 4473325 | 56473.9 |
| lamin tail domain-containing protein | DW869_19115 | Not Available | Positive | 4473353 - 4474282 | 34102.0 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DW869_19120 | Not Available | Positive | 4474306 - 4474737 | 15152.5 |
| sodium ion-translocating decarboxylase subunit beta | DW869_19125 | Not Available | Positive | 4474739 - 4475899 | 40880.4 |
| alpha-amlyase | DW869_19130 | Not Available | Positive | 4476074 - 4476322 | 9267.24 |
| sdr family oxidoreductase | DW869_19135 | Not Available | Negative | 4476418 - 4477176 | 27233.0 |
| esterase family protein | DW869_19140 | Not Available | Negative | 4477181 - 4477999 | 30789.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

