Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_19045 | Not Available | Positive | 4462222 - 4462584 | 13994.2 |
| tlpa family protein disulfide reductase | DW869_19050 | Not Available | Negative | 4462719 - 4463240 | 19820.7 |
| mfs transporter | DW869_19055 | Not Available | Positive | 4463312 - 4464487 | 42786.8 |
| duf2721 domain-containing protein | DW869_19060 | Not Available | Negative | 4464489 - 4464878 | 14601.4 |
| duf3843 family protein | DW869_19065 | Not Available | Positive | 4464997 - 4466166 | 45912.6 |
| 2-hydroxyacid dehydrogenase | DW869_19070 | Not Available | Negative | 4466163 - 4467170 | 37605.3 |
| septum formation protein maf | DW869_19075 | Not Available | Negative | 4467237 - 4467818 | 21744.3 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | DW869_19080 | Not Available | Negative | 4467836 - 4468354 | 19125.2 |
| duf2520 domain-containing protein | DW869_19085 | Not Available | Negative | 4468360 - 4469166 | 29767.2 |
| hypothetical protein | DW869_19090 | Not Available | Negative | 4469166 - 4469492 | 11882.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

