Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_18985 | Not Available | Negative | 4452218 - 4452466 | 9017.95 |
| duf1573 domain-containing protein | DW869_18990 | Not Available | Negative | 4452708 - 4453574 | 32925.5 |
| hypothetical protein | DW869_18995 | Not Available | Negative | 4453578 - 4453799 | 7878.61 |
| dna-binding response regulator | DW869_19000 | Not Available | Positive | 4454053 - 4455051 | 38414.6 |
| hypothetical protein | DW869_19010 | Not Available | Positive | 4457250 - 4457834 | 22781.2 |
| hypothetical protein | DW869_19015 | Not Available | Positive | 4458022 - 4458222 | 7411.74 |
| penicillin-binding protein | DW869_19020 | Not Available | Positive | 4458232 - 4459305 | 39078.5 |
| hypothetical protein | DW869_19025 | Not Available | Positive | 4459302 - 4459691 | 15050.7 |
| hypothetical protein | DW869_19030 | Not Available | Positive | 4460176 - 4460634 | 18069.4 |
| hypothetical protein | DW869_19040 | Not Available | Positive | 4461835 - 4462122 | 11068.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

