Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory system conjugative dna transfer family protein | DW869_18830 | Not Available | Negative | 4414382 - 4416568 | 83061.4 |
| hypothetical protein | DW869_18835 | Not Available | Negative | 4416576 - 4417058 | 18780.5 |
| duf1566 domain-containing protein | DW869_18840 | Not Available | Negative | 4417063 - 4417734 | 24402.6 |
| hypothetical protein | DW869_18845 | Not Available | Negative | 4417742 - 4418254 | 19082.2 |
| conjugative transposon protein tran | DW869_18850 | Not Available | Negative | 4418251 - 4419102 | 32264.8 |
| site-specific dna-methyltransferase | DW869_18855 | Not Available | Negative | 4419112 - 4419924 | 31659.1 |
| hypothetical protein | DW869_18860 | Not Available | Negative | 4419921 - 4420274 | 13709.3 |
| conjugative transposon protein tram | DW869_18865 | Not Available | Negative | 4420288 - 4421439 | 42834.3 |
| hypothetical protein | DW869_18870 | Not Available | Negative | 4421512 - 4421895 | 15087.4 |
| phosphoglucosamine mutase | DW869_18880 | Not Available | Negative | 4422387 - 4423775 | 50475.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

