Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | DW869_18780 | Not Available | Negative | 4405536 - 4406723 | 43529.4 |
| arac family transcriptional regulator | DW869_18785 | Not Available | Positive | 4406989 - 4407888 | 34671.7 |
| eama family transporter | DW869_18790 | Not Available | Negative | 4407891 - 4408784 | 32616.3 |
| hypothetical protein | DW869_18795 | Not Available | Positive | 4408809 - 4409018 | 8198.01 |
| hypothetical protein | DW869_18800 | Not Available | Negative | 4409190 - 4409420 | 9171.14 |
| adenosylmethionine decarboxylase | DW869_18805 | Not Available | Positive | 4409590 - 4411257 | 63032.9 |
| helix-turn-helix domain-containing protein | DW869_18810 | Not Available | Negative | 4411116 - 4411979 | 33224.2 |
| gnat family n-acetyltransferase | DW869_18815 | Not Available | Negative | 4411976 - 4412425 | 17326.0 |
| nucleotidyl transferase abieii/abigii toxin family protein | DW869_18820 | Not Available | Negative | 4412485 - 4413396 | 34701.7 |
| hypothetical protein | DW869_18825 | Not Available | Negative | 4413389 - 4414153 | 29473.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

