Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_18680 | Not Available | Negative | 4392441 - 4392680 | 8731.34 |
| hypothetical protein | DW869_18685 | Not Available | Positive | 4392767 - 4393213 | 16876.5 |
| single-stranded dna-binding protein | DW869_18690 | Not Available | Positive | 4393682 - 4394095 | 14855.4 |
| para family protein | DW869_18695 | Not Available | Positive | 4394342 - 4395097 | 27292.7 |
| hypothetical protein | DW869_18700 | Not Available | Positive | 4395105 - 4395359 | 9337.47 |
| hypothetical protein | DW869_18705 | Not Available | Negative | 4395609 - 4395806 | 7301.79 |
| hypothetical protein | DW869_18710 | Not Available | Positive | 4395825 - 4396076 | 9694.62 |
| parb/repb/spo0j family partition protein | DW869_18715 | Not Available | Positive | 4396130 - 4397884 | 66628.6 |
| duf4313 domain-containing protein | DW869_18720 | Not Available | Positive | 4398526 - 4399041 | 20065.7 |
| hypothetical protein | DW869_18725 | Not Available | Positive | 4399501 - 4399977 | 17928.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

