Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide sugar dehydrogenase | DW869_18565 | Not Available | Positive | 4369197 - 4370444 | 46858.8 |
| lipopolysaccharide biosynthesis protein | DW869_18570 | Not Available | Positive | 4370479 - 4371936 | 54803.6 |
| acyltransferase | DW869_18575 | Not Available | Positive | 4371933 - 4372673 | 28267.4 |
| glycosyltransferase family 2 protein | DW869_18580 | Not Available | Positive | 4372682 - 4373629 | 36462.6 |
| glycosyltransferase | DW869_18585 | Not Available | Positive | 4373633 - 4374631 | 39162.2 |
| hypothetical protein | DW869_18590 | Not Available | Positive | 4374649 - 4375038 | 15534.4 |
| hypothetical protein | DW869_18595 | Not Available | Positive | 4375086 - 4375727 | 24008.6 |
| glycosyltransferase family 1 protein | DW869_18600 | Not Available | Positive | 4375765 - 4376889 | 44091.6 |
| hypothetical protein | DW869_18605 | Not Available | Positive | 4376886 - 4378253 | 51972.3 |
| glycosyltransferase | DW869_18610 | Not Available | Positive | 4378401 - 4379540 | 43550.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

