Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid mobilization relaxosome protein mobc | DW869_18510 | Not Available | Positive | 4359316 - 4359720 | 15028.7 |
| mobilization protein | DW869_18515 | Not Available | Positive | 4359695 - 4360645 | 36193.1 |
| hypothetical protein | DW869_18520 | Not Available | Positive | 4360675 - 4361436 | 29175.1 |
| site-specific integrase | DW869_18525 | Not Available | Positive | 4361444 - 4362658 | 46411.2 |
| hypothetical protein | DW869_18535 | Not Available | Positive | 4363159 - 4363422 | 10203.7 |
| upxy family transcription antiterminator | DW869_18540 | Not Available | Positive | 4363438 - 4363998 | 21680.6 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | DW869_18545 | Not Available | Positive | 4364057 - 4365178 | 41445.6 |
| polysaccharide export protein | DW869_18550 | Not Available | Positive | 4365192 - 4365983 | 29233.5 |
| chromosome partitioning protein para | DW869_18555 | Not Available | Positive | 4365998 - 4368412 | 89892.9 |
| capsular biosynthesis protein | DW869_18560 | Not Available | Positive | 4368481 - 4369188 | 27352.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

